CTFCoder.h

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// Copyright 2019-2020 CERN and copyright holders of ALICE O2.
// See https://alice-o2.web.cern.ch/copyright for details of the copyright holders.
// All rights not expressly granted are reserved.
//
// This software is distributed under the terms of the GNU General Public
// License v3 (GPL Version 3), copied verbatim in the file "COPYING".
//
// In applying this license CERN does not waive the privileges and immunities
// granted to it by virtue of its status as an Intergovernmental Organization
// or submit itself to any jurisdiction.
 
 
#ifndef O2_PHOS_CTFCODER_H
#define O2_PHOS_CTFCODER_H
 
#include <algorithm>
#include <iterator>
#include <string>
#include <array>
#include "DataFormatsPHOS/CTF.h"
#include "DetectorsCommonDataFormats/DetID.h"
#include "DetectorsBase/CTFCoderBase.h"
#include "PHOSReconstruction/CTFHelper.h"
 
class TTree;
 
namespace o2
{
namespace phos
{
 
class CTFCoder : public o2::ctf::CTFCoderBase
{
 public:
  CTFCoder(o2::ctf::CTFCoderBase::OpType op) : o2::ctf::CTFCoderBase(op, CTF::getNBlocks(), o2::detectors::DetID::PHS) {}
  ~CTFCoder() final = default;
 
  template <typename VEC>
  o2::ctf::CTFIOSize encode(VEC& buff, const gsl::span<const TriggerRecord>& trigData, const gsl::span<const Cell>& cellData);
 
  template <typename VTRG, typename VCELL>
  o2::ctf::CTFIOSize decode(const CTF::base& ec, VTRG& trigVec, VCELL& cellVec);
 
  void createCoders(const std::vector<char>& bufVec, o2::ctf::CTFCoderBase::OpType op) final;
 
 private:
  template <typename VEC>
  o2::ctf::CTFIOSize encode_impl(VEC& buff, const gsl::span<const TriggerRecord>& trigData, const gsl::span<const Cell>& cellData);
  void appendToTree(TTree& tree, CTF& ec);
  void readFromTree(TTree& tree, int entry, std::vector<TriggerRecord>& trigVec, std::vector<Cell>& cellVec);
  std::vector<TriggerRecord> mTrgDataFilt;
  std::vector<Cell> mCellDataFilt;
};
 
template <typename VEC>
o2::ctf::CTFIOSize CTFCoder::encode(VEC& buff, const gsl::span<const TriggerRecord>& trigData, const gsl::span<const Cell>& cellData)
{
  if (mIRFrameSelector.isSet()) { // preselect data
    mTrgDataFilt.clear();
    mCellDataFilt.clear();
    for (const auto& trig : trigData) {
      if (mIRFrameSelector.check(trig.getBCData()) >= 0) {
        mTrgDataFilt.push_back(trig);
        auto cellIt = cellData.begin() + trig.getFirstEntry();
        auto& trigC = mTrgDataFilt.back();
        trigC.setDataRange((int)mCellDataFilt.size(), trig.getNumberOfObjects());
        std::copy(cellIt, cellIt + trig.getNumberOfObjects(), std::back_inserter(mCellDataFilt));
      }
    }
    return encode_impl(buff, mTrgDataFilt, mCellDataFilt);
  }
  return encode_impl(buff, trigData, cellData);
}
 
template <typename VEC>
o2::ctf::CTFIOSize CTFCoder::encode_impl(VEC& buff, const gsl::span<const TriggerRecord>& trigData, const gsl::span<const Cell>& cellData)
{
  using MD = o2::ctf::Metadata::OptStore;
  // what to do which each field: see o2::ctd::Metadata explanation
  constexpr MD optField[CTF::getNBlocks()] = {
    MD::EENCODE_OR_PACK, // BLC_bcIncTrig
    MD::EENCODE_OR_PACK, // BLC_orbitIncTrig
    MD::EENCODE_OR_PACK, // BLC_entriesTrig
    MD::EENCODE_OR_PACK, // BLC_packedID
    MD::EENCODE_OR_PACK, // BLC_time
    MD::EENCODE_OR_PACK, // BLC_energy
    MD::EENCODE_OR_PACK  // BLC_status
  };
 
  CTFHelper helper(trigData, cellData);
 
  // book output size with some margin
  auto szIni = sizeof(CTFHeader) + helper.getSize() * 2. / 3; // will be autoexpanded if needed
  buff.resize(szIni);
 
  auto ec = CTF::create(buff);
  using ECB = CTF::base;
 
  ec->setHeader(helper.createHeader());
  assignDictVersion(static_cast<o2::ctf::CTFDictHeader&>(ec->getHeader()));
  ec->setANSHeader(mANSVersion);
  // at every encoding the buffer might be autoexpanded, so we don't work with fixed pointer ec
  o2::ctf::CTFIOSize iosize;
#define ENCODEPHS(beg, end, slot, bits) CTF::get(buff.data())->encode(beg, end, int(slot), bits, optField[int(slot)], &buff, mCoders[int(slot)], getMemMarginFactor());
  // clang-format off
  iosize += ENCODEPHS(helper.begin_bcIncTrig(),    helper.end_bcIncTrig(),     CTF::BLC_bcIncTrig,    0);
  iosize += ENCODEPHS(helper.begin_orbitIncTrig(), helper.end_orbitIncTrig(),  CTF::BLC_orbitIncTrig, 0);
  iosize += ENCODEPHS(helper.begin_entriesTrig(),  helper.end_entriesTrig(),   CTF::BLC_entriesTrig,  0);
 
  iosize += ENCODEPHS(helper.begin_packedID(),    helper.end_packedID(),     CTF::BLC_packedID,    0);
  iosize += ENCODEPHS(helper.begin_time(),        helper.end_time(),         CTF::BLC_time,        0);
  iosize += ENCODEPHS(helper.begin_energy(),      helper.end_energy(),       CTF::BLC_energy,      0);
  iosize += ENCODEPHS(helper.begin_status(),      helper.end_status(),       CTF::BLC_status,      0);
  // clang-format on
  CTF::get(buff.data())->print(getPrefix(), mVerbosity);
  finaliseCTFOutput<CTF>(buff);
  iosize.rawIn = trigData.size() * sizeof(TriggerRecord) + cellData.size() * sizeof(Cell);
  return iosize;
}
 
template <typename VTRG, typename VCELL>
o2::ctf::CTFIOSize CTFCoder::decode(const CTF::base& ec, VTRG& trigVec, VCELL& cellVec)
{
  const auto& header = ec.getHeader();
  checkDictVersion(static_cast<const o2::ctf::CTFDictHeader&>(header));
  ec.print(getPrefix(), mVerbosity);
  std::vector<int16_t> bcInc;
  std::vector<int32_t> orbitInc;
  std::vector<uint16_t> entries, energy, cellTime, packedID;
  std::vector<uint8_t> status;
 
  o2::ctf::CTFIOSize iosize;
#define DECODEPHOS(part, slot) ec.decode(part, int(slot), mCoders[int(slot)])
  // clang-format off
  iosize += DECODEPHOS(bcInc,       CTF::BLC_bcIncTrig);
  iosize += DECODEPHOS(orbitInc,    CTF::BLC_orbitIncTrig);
  iosize += DECODEPHOS(entries,     CTF::BLC_entriesTrig);
  iosize += DECODEPHOS(packedID,    CTF::BLC_packedID);
 
  iosize += DECODEPHOS(cellTime,    CTF::BLC_time);
  iosize += DECODEPHOS(energy,      CTF::BLC_energy);
  iosize += DECODEPHOS(status,      CTF::BLC_status);
  // clang-format on
  //
  trigVec.clear();
  cellVec.clear();
  trigVec.reserve(header.nTriggers);
  status.reserve(header.nCells);
 
  uint32_t firstEntry = 0, cellCount = 0;
  o2::InteractionRecord ir(header.firstBC, header.firstOrbit);
  int64_t diffIR0 = 0;
  bool checkIROK = (mBCShift == 0); // need to check if CTP offset correction does not make the local time negative ?
  Cell cell;
  for (uint32_t itrig = 0; itrig < header.nTriggers; itrig++) {
    // restore TrigRecord
    if (orbitInc[itrig]) {  // non-0 increment => new orbit
      ir.bc = bcInc[itrig]; // bcInc has absolute meaning
      ir.orbit += orbitInc[itrig];
    } else {
      ir.bc += bcInc[itrig];
    }
    firstEntry = cellVec.size();
    if (checkIROK || canApplyBCShift(ir)) { // correction will be ok
      checkIROK = true;
    } else { // correction would make IR prior to mFirstTFOrbit, skip
      cellCount += entries[itrig];
      continue;
    }
    for (uint16_t ic = 0; ic < entries[itrig]; ic++) {
      cell.setPacked(packedID[cellCount], cellTime[cellCount], energy[cellCount], status[cellCount]);
      cellVec.emplace_back(cell);
      cellCount++;
    }
    trigVec.emplace_back(ir - mBCShift, firstEntry, entries[itrig]);
  }
  assert(cellCount == header.nCells);
  iosize.rawIn = trigVec.size() * sizeof(TriggerRecord) + cellVec.size() * sizeof(Cell);
  return iosize;
}
 
} // namespace phos
} // namespace o2
 
#endif // O2_PHOS_CTFCODER_H